Difference between revisions of "Graph Filterbanks"

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== General Information ==
 
== General Information ==
  
* This website provides source code for wavelet transforms on trees, with applications to:
+
* This website provides source code for two-channel wavelet transforms on graphs.
** Distributed data compression for wireless sensor networks
 
** Image coding
 
  
 
* Publications describing these transforms can be found at:
 
* Publications describing these transforms can be found at:
**[http://biron.usc.edu/wiki/index.php/CompressionGroup/DSNProject Distributed Compression for Sensor Networks web page] for transforms used in WSN
+
**[http://biron.usc.edu/wiki/index.php/GraphWavelets Wavelet Filter-banks on Graphs]  
**[http://biron.usc.edu/~godwinsh Godwin Shen's web page] for transforms used in image coding (and WSN)
+
**[http://biron.usc.edu/wiki/index.php/Sunil_Kumar Sunil K. Narang's web page]  
 
 
* This page is maintained by Godwin Shen
 
** Email: godwinsh@usc.edu
 
  
 +
* This page is maintained by Sunil K. Narang
 +
** Email: narang.sunil at gmail dot com
  
 
== Source Code ==
 
== Source Code ==
* Comments, questions or concerns should be directed to: godwinsh@usc.edu
+
<!--this comments the text * [http://biron.usc.edu/~kumarsun/Codes/GraphWaveletsDemo.zip Graph-QMF Matlab Source Code]
 +
**This toolbox contains demo examples of implementing two-channel graph-QMF wavelet filterbanks, on the vertices of an undirected weighted graph. The algorithm and proposed formulation can be found in:
 +
# S. K. Narang and Antonio Ortega, "Perfect Reconstruction Two-Channel Wavelet Filter-Banks For Graph Structured Data", <i> in IEEE Transactions on Signal Processing </i>[http://arxiv.org/abs/1106.3693<small><b> PDF format</b></small>]
 +
<br>
 +
* [http://biron.usc.edu/~kumarsun/Codes/graphBior-Filterbanks.zip GraphBior Matlab Source Code]
 +
**This toolbox contains demo examples of implementing two-channel graphBior wavelet filterbanks, on the vertices of an undirected weighted graph. The algorithm and proposed formulation can be found in:
 +
# S. K. Narang and Antonio Ortega, "Compact Support Biorthogonal Wavelet Filterbanks for Arbitrary Undirected Graphs", <i> under review in IEEE Transactions on Signal Processing </i>[http://arxiv.org/pdf/1210.8129v1.pdf<small><b> PDF format</b></small>]-->
  
* [http://biron.usc.edu/~godwinsh/WSN_SampleCode_v6.zip MATLAB source code for wavelets on trees in WSN]
+
* [http://sipi.usc.edu/~ortega/Software/Graph_Wavelets_Demo.zip Graph Wavelets Matlab Source Code]
** Last Updated On: February 24, 2010
+
**It contains demo examples implementing two-channel graph-QMF and graphBior wavelet filterbanks, on the vertices of an undirected weighted graph. The algorithms and proposed formulations can be found in:
*** Added experiment using Great Duck Island data (2/24/10)
+
# S. K. Narang and Antonio Ortega, "Perfect Reconstruction Two-Channel Wavelet Filter-Banks For Graph Structured Data", <i> in IEEE Transactions on Signal Processing </i>[http://arxiv.org/abs/1106.3693<small><b> PDF format</b></small>]
*** Fixed bugs in transform initialization (11/13/09)
+
# S. K. Narang and Antonio Ortega, "Compact Support Biorthogonal Wavelet Filterbanks for Arbitrary Undirected Graphs", <i> in IEEE Transactions on Signal Processing </i>[http://arxiv.org/pdf/1210.8129v1.pdf<small><b> PDF format</b></small>]
*** Fixed a bug in cost computations (9/24/09)
+
* [https://github.com/bwdeng20/thgsp thgsp: Pytorch-based GSP package by Bowen Deng]
*** New cost computations added (8/20/09)
 
** This code provides implementations of the transforms described in the related publications shown below
 
** The main files to start with are Example_LossyCoding.m and Example_LosslessCoding.m
 
  
* [http://biron.usc.edu/~godwinsh/ICASSP10_Code.zip MATLAB source code for even/odd optimization in WSN]
+
==Installation==
** This code implements the even/odd optimization algorithm in our ICASSP 2010 paper
+
* The code is written in Matlab(c) version R2011a.
** Last Updated On: March 25, 2010
+
* To install the code, simply unpack the directory in a Matlab folder.
  
* [http://biron.usc.edu/~godwinsh/IPSN08_Code.zip MATLAB source code for joint routing and transform optimization in WSN]
+
== How to run demos ==
** This code implements the joint optimization algorithm in our IPSN 2008 paper
+
* Demo 1 implements a 2-dimensional graph-QMF filterbank on an 8-connected graph-formulation of any 2D digital image.
** Last Updated On: March 25, 2010
+
** For a K-level wavelet-tree decomposition, the algorithm automatically crops the input image into a square image of size multiple of 2^K.
 +
** The output is graph wavelet-coefficients ordered in the image format as shown
  
 +
[[File:wav_coeffs_ordering.jpg | alt=(any caption) | 500px | Wavlet ordering]]
  
== Related Publications ==
+
** To run the demo, execute any of the following commands:
<ul>
 
<li> G. Shen and A. Ortega, "Transform-based Distributed Data Gathering". <i>To Appear in IEEE Transactions on Signal Processing</i>.
 
[http://arxiv.org/abs/0909.5177v3 <small><b>arXiv:0909.5177v3</b></small>]</ul>
 
  
<ul>
+
1 filterbanks on a default image and parameters
<li> S.K. Narang, G. Shen and A. Ortega, "Unidirectional Graph-based Wavelet Transforms for Efficient Data Gathering in Sensor Netowkrs". <i>In Proc. of 2010 IEEE Intl. Conf. on Acoustics, Speech and Signal Processing (ICASSP'10),</i> Dallas, April 2010.</ul>
+
  [wav_coeffs] = QMF_filterbank_demo_1();
 +
2 filterbanks on a given image
 +
  filename = 'sample1.jpg';
 +
  filetype = 'jpeg';
 +
  [wav_coeffs] = QMF_filterbank_demo_1(filename,filetype);
 +
3 filterbanks on a given image with optional parameters
 +
  opt = struct('max_level',3,'filterlen',20,'nnz_factor',1);
 +
  filename = 'sample1.jpg';
 +
  filetype = 'jpeg';
 +
  [wav_coeffs] = QMF_filterbank_demo_1(filename,filetype,opt);
 +
  % where max_level is the number of decomposition level,  
 +
  % filterlen is length of approximated FIR Meyer kernel
 +
  % nnz_factor is the fraction of non-zero high-pass coefficients used in reconstruction
 +
 
 +
* Demo 2 implements a 2-dimensional graph-QMF filterbank on the Minnesota traffic graph.
 +
** To run the demo, execute in Matlab
 +
  [wav_coeffs, channel_info] = QMF_filterbank_demo_2();
 +
  % where wav_coeffs are the output wavelet coefficients ordered as a vector
 +
  % channel_info(i).name is the name of subband,  
 +
  % channel_info(i).nodes is the set of indices of wavelet coefficients in the ith subband.
  
<ul>
+
== Contact ==
<li> G. Shen, S. Narang and A. Ortega, "Adaptive Distributed Transforms for Irregularly Sampled Wireless Sensor Networks". <i>In Proc. of 2009 IEEE Intl. Conf. on Acoustics, Speech and Signal Processing (ICASSP'09),</i> Taipei, April 2009.
+
* Comments, questions or concerns should be directed to: Sunil K. Narang (narang.sunil at gmail dot com)
[http://biron.usc.edu/~godwinsh/Papers/ICASSP09_Filter_Opt.pdf <small><b>PDF format</b></small>]</ul>
 
  
 +
== Related Publications ==
 
<ul>
 
<ul>
<li> G. Shen and A. Ortega, "Joint Routing and 2D Transform Optimization for Irregular Sensor Network Grids Using Wavelet Lifting". <i>In Proc. of Fifth Intl. Conf. on Information Processing in Sensor Networks (IPSN'08),</i> St. Louis, April 2008.
+
<li>
[http://biron.usc.edu/~godwinsh/Papers/IPSN08ShenOrtega.pdf <small><b>PDF format</b></small>]</ul>
+
S. K. Narang and Antonio Ortega, "Perfect Reconstruction Two-Channel Wavelet Filter-Banks For Graph Structured Data", <i>In IEEE Transactions of Signal Processing, also available at Tech. Rep. arXiv:1106.3693v3 </i></ul>
 
 
 
<ul>
 
<ul>
<li> G. Shen and A. Ortega, "Optimized Distributed 2D Transforms for Irregularly Sampled Sensor Network Grids Using Wavelet Lifting". <i>In Proc. of 2008 IEEE Intl. Conf. on Acoustics, Speech and Signal Processing (ICASSP'08),</i> Las Vegas, April 2008.
+
<li>S.K. Narang and A. Ortega, "Downsampling Graphs Using Spectral Theory",<i>IEEE Intl. Conf. on Acoustics, Speech and Signal Processing (ICASSP'11),</i>[http://biron.usc.edu/~kumarsun/papers/ICASSP11Downsampling.pdf <small><b> PDF format</b></small>],
[http://biron.usc.edu/~godwinsh/Papers/ICASSP08ShenOrtega.pdf <small><b>PDF format</b></small>]</ul>
+
[http://biron.usc.edu/~kumarsun/Posters/ICASSPPoster2011.pdf <small><b> Poster</b></small>]
 
+
</ul>
  
 
== Related Links ==
 
== Related Links ==
 +
* [http://biron.usc.edu/wiki/index.php/GraphWavelets Wavelet Filterbanks on Graph]
 
* [http://anrg.usc.edu/SenZip/ SenZip]
 
* [http://anrg.usc.edu/SenZip/ SenZip]
 
* [http://biron.usc.edu/wiki/index.php/CompressionGroup/DSNProject Distributed Compression for Sensor Networks]
 
* [http://biron.usc.edu/wiki/index.php/CompressionGroup/DSNProject Distributed Compression for Sensor Networks]
* [http://biron.usc.edu/wiki/index.php/GraphWavelets Wavelet Filterbanks on Graph]
 
 
* [http://biron.usc.edu/wiki/index.php?title=CompressionGroup Compression Research Group]
 
* [http://biron.usc.edu/wiki/index.php?title=CompressionGroup Compression Research Group]
  
 
== Acknowledgements ==
 
== Acknowledgements ==
* This work was supported in part by NASA under grant AIST-05-0081
+
* This work was supported by NSF under grant CCF-1018977

Latest revision as of 08:45, 5 February 2021

General Information

  • This website provides source code for two-channel wavelet transforms on graphs.
  • This page is maintained by Sunil K. Narang
    • Email: narang.sunil at gmail dot com

Source Code

  • Graph Wavelets Matlab Source Code
    • It contains demo examples implementing two-channel graph-QMF and graphBior wavelet filterbanks, on the vertices of an undirected weighted graph. The algorithms and proposed formulations can be found in:
  1. S. K. Narang and Antonio Ortega, "Perfect Reconstruction Two-Channel Wavelet Filter-Banks For Graph Structured Data", in IEEE Transactions on Signal Processing PDF format
  2. S. K. Narang and Antonio Ortega, "Compact Support Biorthogonal Wavelet Filterbanks for Arbitrary Undirected Graphs", in IEEE Transactions on Signal Processing PDF format

Installation

  • The code is written in Matlab(c) version R2011a.
  • To install the code, simply unpack the directory in a Matlab folder.

How to run demos

  • Demo 1 implements a 2-dimensional graph-QMF filterbank on an 8-connected graph-formulation of any 2D digital image.
    • For a K-level wavelet-tree decomposition, the algorithm automatically crops the input image into a square image of size multiple of 2^K.
    • The output is graph wavelet-coefficients ordered in the image format as shown

(any caption)

    • To run the demo, execute any of the following commands:

1 filterbanks on a default image and parameters

  [wav_coeffs] = QMF_filterbank_demo_1();

2 filterbanks on a given image

  filename = 'sample1.jpg';
  filetype = 'jpeg';
  [wav_coeffs] = QMF_filterbank_demo_1(filename,filetype);

3 filterbanks on a given image with optional parameters

  opt = struct('max_level',3,'filterlen',20,'nnz_factor',1);
  filename = 'sample1.jpg';
  filetype = 'jpeg';
  [wav_coeffs] = QMF_filterbank_demo_1(filename,filetype,opt);
  % where max_level is the number of decomposition level, 
  % filterlen is length of approximated FIR Meyer kernel
  % nnz_factor is the fraction of non-zero high-pass coefficients used in reconstruction
  
  • Demo 2 implements a 2-dimensional graph-QMF filterbank on the Minnesota traffic graph.
    • To run the demo, execute in Matlab
  [wav_coeffs, channel_info] = QMF_filterbank_demo_2();
  % where wav_coeffs are the output wavelet coefficients ordered as a vector
  % channel_info(i).name is the name of subband, 
  % channel_info(i).nodes is the set of indices of wavelet coefficients in the ith subband.

Contact

  • Comments, questions or concerns should be directed to: Sunil K. Narang (narang.sunil at gmail dot com)

Related Publications

  • S. K. Narang and Antonio Ortega, "Perfect Reconstruction Two-Channel Wavelet Filter-Banks For Graph Structured Data", In IEEE Transactions of Signal Processing, also available at Tech. Rep. arXiv:1106.3693v3
  • S.K. Narang and A. Ortega, "Downsampling Graphs Using Spectral Theory",IEEE Intl. Conf. on Acoustics, Speech and Signal Processing (ICASSP'11), PDF format, Poster

Related Links

Acknowledgements

  • This work was supported by NSF under grant CCF-1018977